Soil bacteria and fungi communities are shaped by elevation influences in Colombian forest and páramo natural ecosystems

The influence of elevation on natural terrestrial ecosystems determines the arrangements of microbial communities in soils to be associated with biotic and abiotic factors. To evaluate changes of fungi and bacteria at the community level along an elevational gradient (between 1000 and 3800 m.a.s.l.), physicochemical measurements of soils, taxonomic identifications of plants, and metabarcoding sequences of the 16S rRNA gene for bacteria and the ITS1 region for fungi were obtained. The bacterial taxonomic composition showed that Acidobacteriota increased in abundance with elevation, while Actinobacteriota and Verrucomicrobiota decreased. Furthermore, Firmicutes and Proteobacteria maintained maximum levels of abundance at intermediate elevations (1200 and 2400 m.a.s.l.). In fungi, Ascomycota was more abundant at higher elevations, Basidiomycota tended to dominate at lower elevations, and Mortierellomycota had a greater presence at intermediate sites. These results correlated with the edaphic parameters of decreasing pH and increasing organic carbon and available nitrogen with elevation. In addition, the Shannon index found a greater diversity in bacteria than fungi, but both showed a unimodal pattern with maximum values in the Andean Forest at 2400 m.a.s.l. Through the microbial characterization of the ecosystems, the elevational gradient, soil properties, and vegetation were found to exert significant effects on microbial communities and alpha diversity indices. We conclude that the most abundant soil microorganisms at the sampling points differed in abundance and diversity according to the variations in factors influencing ecological communities. (AU)

Composición y distribución de hepáticas (Marchantiophyta) en un intervalo altitudinal en la Cordillera Oriental de Colombia / Composition and distribution of liverworts (Marchantiophyta) in a continuous altitudinal range on the Cordillera Oriental of Colombia

Resumen La composición de especies de hepáticas sobre los Andes del Norte varía con la altitud en relación con diferentes factores bióticos (vegetación) y abióticos (temperatura, humedad y luminosidad). Para probar esta afirmación se determinó la diversidad y distribución de las Marchantiophytas en un rango altitudinal entre los 2 400 y 3 400 m sobre la Cordillera Oriental colombiana, estableciendo cómo éstas varían entre altitudes y zonas de vida con respecto a los factores abióticos. Se realizaron muestreos cada 200 m y se registraron datos ambientales durante un año. Se encontraron 162 especies, la composición de hepáticas varió a lo largo del gradiente altitudinal con un gran número de especies únicas en cada altitud. Se encontró la máxima diversidad en los 3 000 m, con una dominancia del hábito folioso y de especies epifitas, mientras que la mayor riqueza de familias y géneros se presentó entre los 3 200 y 3 400 m. Anoplolejeunea conferta presentó la mayor cobertura en la zona así como el mayor valor del índice de valor de importancia (IVI) y distribución altitudinal más amplia, ubicándose desde los 2 400 hasta 3 000 m en cuatro diferentes sustratos. Las hepáticas se distribuyeron altitudinalmente de manera diferencial, con una diversidad beta alta (0.864) debido al recambio altitudinal de especies, con más del 30 % de disimilaría en la composición de especies cada 200 m altitudinales, dependiendo principalmente de cambios en la luminosidad. Consecuentemente, la temperatura, humedad y luminosidad y su relación con la vegetación son determinantes en la diversidad y distribución de las hepáticas en la Cordillera Oriental de los Andes colombianos.

Abstract The species composition of liverworts varies with altitude in the Northern part of the Andes due to the relationship of biotic (vegetation) and abiotic factors (temperature, humidity, and sunlight brightness). In order to test this affirmation we determined the diversity, species composition, abundance, and distribution of species of Marchantiophyta in an altitudinal range from 2 400 to 3 400 m on the Colombian Cordillera Oriental, and established how these vary with altitude and life-zones, regarding abiotic factors. Samples, taken every 200 m in the altitudinal range, and environmental data were registered during a year. We found 162 species, the composition of liverworts varied throughout the altitudinal gradient with a high number of unique species in each altitude. The maximum diversity was found at 3 000 m, along with a dominance of leafy habit and epiphytic species, while the higher richness of families and genera was found between 3 200 and 3 400 m. Anoplolejeunea conferta had the largest value of coverage in the zone, the highest value of importance value index (IVI), and the widest altitudinal distribution, from 2 400 to 3 000 m in four different substrates. The liverworts were distributed differently with altitude, we found a high beta diversity (0.864) due to the replacement of species, with more that 30 % of dissimilarity in species composition every 200 altitudinal meters, mainly depending on sunlight brightness variation. Accordingly, we found that abiotic factors like temperature, humidity, and sunlight brightness and its relationship vegetation are determinant in the diversity and altitudinal distribution of liverworts in the study area. Rev. Biol. Trop. 66(2): 559-570. Epub 2018 June 01.

Induction of resistance to Colletotrichum truncatum in lima bean / Indução de resistência à Colletotrichum truncatum em feijão-fava

Anthracnose (Colletotrichum truncatum) is one of the major diseases of the lima bean culture, found in production fields, causing decrease in productivity. The objective of this study was to evaluate the effect of abiotic and biotic inducers applied in lima bean plants to reduce anthracnose severity. Lima bean accessions were used and treated with: the abiotic inducers calcium silicate (Agrosilício Plus) and silicate clay (Rocksil), using the 3 g dose.L-1; the biotic inducer citric biomass extract (Ecolife), at the dose of 3 mL.L-1; and distilled water as control. To evaluate the resistance induction, the results of severity and degree of resistance of fava bean at 7, 11, 15, 19 and 23 days after inoculation were considered according to the scale of grades and classes of reactions. The design was a randomized block in a factorial arrangement 4 × 15 (treatments × hits) with four blocks. Resistance inducers Agrosilicon Plus, Ecolife and Rocksil have potential to be used in the management of anthracnose in fava bean. The studied accesses showed degree of resistance, being able to be explored in relation to obtaining anthracnose resistant cultivars in future breeding programs of this crop.(AU)

A antracnose é uma das principais doenças da cultura do feijão-fava (Phaseolus lunatus L.), sendo encontrada em campos de produção e com grande potencial de causar redução na produtividade. O objetivo do trabalho foi determinar o efeito de indutores abiótico e biótico aplicados em plantas de feijão-fava, a fim de diminuir a severidade da antracnose. Foram utilizados 15 acessos de feijão-fava, tratados com os indutores abióticos: silicato de cálcio (Agrosilício Plus) e argila silicatada (Rocksil), utilizando a dose de 3 g.L-1 para ambos os produtos; e o indutor biótico biomassa cítrica (Ecolife), na dose de 3 mL.L-1. Como testemunha, aplicou-se apenas água destilada. Para avaliar a indução de resistência, foram considerados os resultados de severidade e grau de resistência dos acessos de feijão-fava aos 7, 11, 15, 19 e 23 dias após a inoculação, de acordo com escala de notas e classes de reações. O delineamento utilizado foi em blocos casualizados, em arranjo fatorial simples 4 × 15 (tratamentos × acessos) com quatro blocos. Os indutores de resistência Agrosilício Plus, Ecolife e Rocksil apresentaram potencial para serem utilizados no manejo da antracnose em feijão-fava. Os acessos estudados revelaram grau de resistência, podendo ser explorados quanto à obtenção de cultivares resistentes à antracnose em futuros programas de melhoramento genético dessa cultura.(AU)

Recursos bióticos en la atención de la enfermedad / Biotic resources in the care of the disease

Un amplio sector de la población no cuenta con los servicios de la medicina institucionalizada, o accede a ella de manera esporádica cuando la enfermedad le exige un tratamiento más complejo. Por esta razón, el presente Artículo de investigación expone la utilización de los recursos bióticos de la medicina tradicional, además de elementos de la biomedicina, e incluso de la medicina alternativa, para el tratamiento de las enfermedades dentro del círculo familiar, tomando como base los datos obtenidos de la investigación sobre la medicina doméstica utilizada en Atecucario, una comunidad mestiza del Estado de Michoacán, México.

Tick loads in Bos taurus cattle grazing in two contrasting production systems / Carga de garrapatas en bovinos Bos taurus que pastorean en dos sistemas productivos contrastantes

Objectives. To relate the effect of biotic and abiotic factors on Rhipicephalus (Boophilus) microplus tick loads on cows grazing either in intensive silvopastoral systems (ISS) (Lucerna) or in grass pastures associated with sugarcane plantations (La Isabela). Materials and methods . Tick counts were performed on 27 Lucerne breed animals that were in different physiological states, six of which were grazing on forage grass paddocks associated with commercial sugarcane plantations and the remaining animals grazed in an ISS based on Leucaena leucocephala and Cynodon plectostachyus. The tick counts were made every 15 days. The data of temperature, humidity, and radiation were taken from a weather station that was inside the ISS. Results . There was a weak relationship between saturation deficit and tick load (R2=0.34) and another between UV radiation and tick load (R2=0.205) for animals grazing in ISS. There were differences in tick counts when comparing animals of similar productivity from both systems evaluated: in La Isabela (sugarcane grass paddocks) average counts were 311 ticks perceptible to the touch (TPT) and in Lucerna (ISS farm) average counts were 206 TPT (p= 0.02). Additionally, there were greater tick counts in high productivity cows compared to low productivity cows. Conclusions . The abiotic and biotic factors of the ecosystem and animal productivity can affect the TPT counts. In ISS systems, tick counts can be lower than those observed in monoculture grazing systems.

RESUMEN Objetivos . Relacionar el efecto de algunos factores bioticos y abioticos sobre las cargas de la garrapata Rhipicephalus (Boophilus) microplus en hembras bovinas que pastorean en sistemas silvopastoriles intensivos (SSPi)(Lucerna) y en monocultivos asociados a cañaduzales (La Isabela). Materiales y métodos. Se realizaron conteos en 27 animales de raza Lucerna en diferentes estados fisiológicos, seis de los cuales se encontraban pastoreando en lotes de gramíneas forrajeras asociados con plantaciones de caña comerciales y los animales restantes pastoreaban en SSPi basados en Leucaena leucocephala y Cynodon plectostachyus. El conteo de garrapatas se efectuó cada 15 días. Los datos de temperatura, humedad y radiación se tomaron de una estación meteorológica que se encontraba en el interior del SSPi. Resultados . Se encontró una relación débil entre el déficit de saturación y los conteos de garrapatas (R2=0.34) y entre la radiación UV y los conteos de garrapatas (R2=0.205) para los bovinos pastoreando en SSPi. Hubo diferencia entre los conteos en animales con similar productividad en ambos sistemas evaluados; siendo el promedio total de garrapatas perceptibles al tacto (GPT) de 311 para La Isabela y de 206 GPT para Lucerna (p=0.02). Hubo mayor número de GPT en hembras con mayor productividad en comparación con las de baja productividad (p<0.05). Conclusiones . Los factores bióticos y abióticos del ecosistema pueden influir en el promedio de GPT, al igual que el nivel de productividad de los animales. En SSPi, la carga de garrapatas puede ser inferior a la de sistemas de pastoreo en monocultivo.

Endoparasites of wild animals from three biomes in the State of Mato Grosso, Brazil / Endoparasitas de animais silvestres de três biomas do Mato Grosso, Brasil

The population of wild animals is regulated by many biotic and abiotic factors, and parasites are a biotic factor that affects the dynamic and density of host populations. From 2002 to 2014, 62 wild animals from the biomes Pantanal, Amazon, and "Cerrado" (or Savanna), which died in attendance in the veterinary hospital or have been road-killed, underwent necropsy for parasitological examination. Overall, 36 species of parasites were identified from 24 host species. Among the parasites, the most prevalent order was Oxyurida (29.1%), followed by Strongylida (20.9%), Spirurida (19.4%), Ascaridida (16.2%), Pentastomida (3.2%), Echinostomida (3.2%), Gygantorhynchia (3.2%), Rhabditida (1.6%), Plagiorchiida (1.6%), and Monilimorfida (1.6%), especially nematodes, which have more biotic potential and is more easily adapted to the environment than other classes. The occurrence of endoparasites was observed more frequently in endothermic than ectothermic animals, and herein is reported eleven new host occurrences for endoparasites in wild animals. The study has contributed to the knowledge on the biodiversity of parasites in wild animals from three biomes in central-western Brazil.(AU)

Populações de animais selvagens são reguladas por diversos fatores bióticos e abióticos, e parasitas são um fator biótico que afetam a dinâmica e a densidade de populações. De 2002 até 2014, 62 animais silvestres provenientes dos biomas Pantanal, Amazônia e Cerrado, que vieram a óbito no atendimento do hospital veterinário ou foram encontrados atropelados em rodovias, foram submetidos à necropsia parasitológica. Ao todo 36 espécies de parasitas foram identificadas em 24 espécies de hospedeiros. Entre os parasitas, a ordem mais prevalente foi Oxyurida (29,1%), seguida por Strongylida (20,9%), Spirurida (19,4%), Ascaridida (16,2%), Pentastomida (3,2%), Echinostomida (3,2%), Gygantorhynchia (3,2%), Rhabditida (1,6%), Plagiorchiida (1,6%) e Monilimorfida (1,6%), destacando-se os nematódeos, por seu maior potencial biótico e facilidade de adaptação ao meio do que as demais classes. A maior ocorrência de endoparasitas foi observada em animais endotérmicos que ectotérmicos, e este estudo registra onze novas ocorrências de hospedeiros para endoparasitas de animais selvagens. O estudo contribui para o conhecimento da biodiversidade de parasitas em animais silvestres dos três biomas do Centro-Oeste do Brasil.(AU)

Variação temporal do efluxo de CO2do solo em sistemas agroflorestais com palma de óleo na Amazônia Oriental / Temporal variation of soil CO2 efflux in oil palm-based agroforestry systems in eastern Amazon

The soil carbon dioxide (CO2) efflux dynamics and its controlling factors of Amazonian agroforestry systems are poorly understood. The objective of this study was to evaluate the temporal variation of soil CO2 efflux in oil palm-based agroforestry systems and the relation between efflux and biotic (microbial and total soil carbon, microbial respiration, fine roots, individual components of agroforestry systems (AFS)) and abiotic factors (soil moisture and temperature). The measurements were taken during the less rainy (December 2010) and rainy (May 2011) periods. The soil CO2 efflux was highest during the rainy season, probably due to increased microbial activity influenced by climatic factors coupled with biotic factors. The soil CO2 efflux correlated positively with soil moisture and microbial biomass carbon and negatively with soil temperature and metabolic quotient, but these correlations were weak. The soil CO2 efflux was sensitive to the type of agroforestry system and to rainfall seasonality.

A dinâmica do efluxo de dióxido de carbono (CO2) do solo e seus fatores controladores em sistemas agroflorestais da Amazônia são pouco compreendidas. O objetivo deste estudo foi avaliar a variação temporal do efluxo de CO2 do solo em sistemas agroflorestais onde a palma de óleo é a cultura principal e sua relação com fatores bióticos (carbono microbiano do solo, carbono total do solo, respiração microbiana do solo, raízes finas do solo, indivíduos componentes dos sistemas agroflorestais (SAFs) ) e abióticos (umidade e temperatura do solo). As medições foram realizadas nos períodos menos chuvoso (dezembro de 2010) e chuvoso (maio de 2011). O efluxo de CO2 do solo foi mais alto no período chuvoso, provavelmente, devido à maior atividade microbiana nesse período influenciada por fatores climáticos aliados a fatores bióticos. O efluxo de CO2do solo se correlacionou positivamente com umidade do solo e carbono da biomassa microbiana e negativamente com temperatura do solo e quociente metabólico, porém as correlações foram fracas. O efluxo de CO2do solo foi sensível ao tipo de sistema agroflorestal e a sazonalidade da precipitação.

Factores extrínsecos e intrínsecos asociados a poblaciones fúngicas micotoxigénicas de granos de maíz (Zea mays L) almacenados en silos bolsa en Argentina / Extrinsic and intrinsic factors associated with mycotoxigenic fungi populations of maize grains (Zea mays L.) stored in silobags in Argentina

Con el objeto de caracterizar las poblaciones fúngicas, en particular las especies potencialmente micotoxigénicas, que pueden contaminar los granos de maíz almacenados en silos bolsa con un contenido de humedad superior al recomendado como seguro, se evaluaron 270 muestras extraídas al inicio, a los 90 días y al final de un período de almacenamiento de 5 meses. En dichas muestras se cuantificó e identificó la biota fúngica y se determinó la contaminación con fumonisinas y aflatoxinas. Asimismo, se evaluó el efecto de factores extrínsecos (ambiente), intrínsecos (granos) y tecnológicos (ubicación de los granos en el perfil del silo bolsa) sobre las poblaciones totales y micotoxigénicas. El pH de los granos y el nivel de O2 se redujeron significativamente a los 5 meses, mientras que la concentración de CO2 se incrementó en igual período. Los recuentos totales de la micobiota fueron significativamente mayores en los granos ubicados en el estrato superior del silo bolsa. Se identificaron especies micotoxigénicas de Fusarium, Aspergillus, Penicillium y Eurotium. La frecuencia de aislamiento de Fusarium verticillioides se redujo al final del almacenamiento y Aspergillus flavus solo se aisló en el inicio del almacenamiento. Los recuentos de Penicillium spp. y Eurotium spp. se incrementaron al final del almacenamiento. El 100 % de las muestras presentaron contaminación con fumonisinas, con niveles máximos de 5,707 mg/kg, mientras que las aflatoxinas contaminaron el 40 % de las muestras con niveles máximos de 0,0008 mg/kg. Las condiciones ambientales y de sustrato generadas durante el almacenamiento produjeron cambios en la composición de las poblaciones fúngicas y limitaron el desarrollo de hongos micotoxigénicos y la producción de micotoxinas.

In order to determine the behavior of mycotoxin-producing fungal populations linked with silobags stored corn grains with a moisture content greater at the recommended as safe, 270 samples taken in three times (beginning, 90 days, final) over a five month period of storage were evaluated. The fungal biota was quantified and identified and the contamination with fumonisin and aflatoxin was determined. Extrinsic factors (environment), intrinsic factors (grains) and technological factors (location of the grains in the profile of silobag) were taken into account to evaluate the presence and quantity of total and mycotoxigenic fungal populations. The pH of grains and O2 levels were significantly reduced after five months, while CO2 concentration increased in the same period. The total counts of mycobiota were significantly higher in grains located in the top layer of silobag. Mycotoxigenic species of Fusarium, Aspergillus, Penicillium and Eurotium were identified. The frequency of isolation of Fusarium verticillioides decreased at the end of storage and Aspergillus flavus was isolated only at the beginning of storage. The counts of the Penicillium spp. and Eurotium spp. were increased at the end of storage. Fumonisin contamination was found in all the samples (100 %) with maximum levels of 5.707 mg/kg whereas aflatoxin contaminated only 40 % with maximum levels of 0.0008 mg/kg. The environmental and substrate conditions generated during the storage limited the development of mycotoxigenic fungi and mycotoxin production.

Tabanidae (Insecta: Diptera): caracterização, ecologia e interação com a população Quilombola da Ilha da Marambaia, Rio de Janeiro, Brasil / Tabanidae (Insecta: Diptera): characterization, ecology and interaction with the Quilombo population of the island of Marambaia, Rio de Janeiro, Brazil

Os tabânidas são moscas de importância sanitária por sua capacidade de vetorar diversos agentes etiológicos entre os vírus, bactérias, protozoários e helmintos. Apesar disso, poucos estudos ecológicos têm sido realizados no Brasil com objetivo de elucidar os aspectos epidemiológicos que influenciam seus comportamentos como indivíduos e população. No estado do Rio de Janeiro o último registro bibliográfico sobre os tabânidas foi feito na década de 1950. O presente estudo objetivou conhecer a tabanofauna da Ilha da Marambaia, Mangaratiba, Rio de Janeiro, avaliar a influência de fatores bióticos e abióticos sobre seu comportamento e conhecer as representações sociais que tem a comunidade residente acerca desses insetos. Foram identificadas 31 espécies das quais uma é nova, e seis foram registradas pela primeira vez no estado. As espécies mais abundantes foram Diachlorus bivittatus Wiedemann, 1828, Diachlorus distinctus Lutz, 1913, Tabanus occidentalis Linnaeus, 1758, Tabanus triangulum Wiedemann, 1828 e Dichelacera walteri sp. nov. Foram registradas como ocorrentes no estado do Rio de Janeiro Esenbeckia lugubris (Macquart, 1838), Dichelacera walteri sp. nov., Phaeotabanus cajennensis (Fabricius, 1787), Tabanus claripennis (Bigot, 1892), Tabanus discus Wiedemann, 1828, and Tabanus pungens Wiedemann, 1828. A comunidade residente na Ilha da Marambaia define as mutucas como somente uma praga, faltando construtos sociais mais elaborados sobre a biologia, comportamento e o papel dos tabânidas na natureza, o que pode vir a facilitar ações educação sanitária e ambiental...

Tabanids are flies of health importance for its ability to vectoring aetiological agents between viruses, bacterias, protozoa and helminths. Nevertheless, few ecological studies have been conducted in Brazil in order to elucidate the epidemiological aspects that influence their behavior as individuals and population. In the state of Rio de Janeiro last bibliographic record on tabanids was made in the 1950s. This study aimed to know the tabanofauna the island of Marambaia, Mangaratiba, Rio de Janeiro, the influence of biotic and abiotic factors on their behavior and the social representations that have the resident community about these insects. We identified 31 species of which one is new, and six are recorded for the time first in the state. The most abundant species were Diachlorus bivittatus Wiedemann, 1828, Diachlorus distinctus Lutz, 1913, Tabanus occidentalis Linnaeus, 1758, Tabanus triangulum Wiedemann, 1828 and Dichelacera walteri sp. nov. Esenbeckia lugubris (Macquart, 1838), Dichelacera walteri sp. nov., Phaeotabanus cajennensis (Fabricius, 1787), Tabanus claripennis (Bigot, 1892), Tabanus discus Wiedemann, 1828, and Tabanus pungens Wiedemann, 1828 were recorded as occurring in the state of Rio de Janeiro. The resident community on the island defines the horseflies only as a pest, missing more elaborate social constructs about the biology, behavior and the role of tabanids in nature, which can facilitate health and environmental education...

Variación diurna de la composición bacterioplanctónica y daño en el ADN de la comunidad microbiana de una laguna oligotrófica de los Andes / Diurnal variation in bacterioplankton composition and DNA damage in the microbial community from an Andean

La Laguna Azul es un ambiente oligotrófi co localizado a 4560 m de altura y sometido a elevados niveles de radiación solar. La composición de su comunidad bacterioplanctónica fue analizada empleando la técnica de electroforesis en gradiente desnaturalizante y se investigó el impacto de la radiación ultravioleta cuantifi cando los dímeros de pirimidina (CPD). Además, se expusieron simultáneamente cultivos puros de Acinetobacter johnsonii A2 y Rhodococcus sp. A5 para estudiar la acumulación de CPD. El análisis de los geles mostró siete secuencias pertenecientes a Alpha-proteobacteria (1 banda), Beta-proteobacteria (1 banda), Bacteroidetes (2 bandas), Actinobacteria (1 banda) y Firmicutes (1 banda). A lo largo del día se observaron cambios mínimos en la composición de la comunidad y no se detectaron CPD. A. johnsonii A2 presentó un daño bajo mientras que Rhodococcus sp. A5 no presentó daño en su ADN, sugiriendo que la comunidad bacteriana está muy bien adaptada a este ambiente altamente irradiado

Laguna Azul is an oligotrophic lake situated at 4,560 m above sea level and subject to a high level of solar radiation. Bacterioplankton community composition (BCC) was analysed by denaturing gradient gel electrophoresis and the impact of solar ultraviolet radiation was assessed by measuring cyclobutane pyrimidine dimers (CPD). Furthermore, pure cultures of Acinetobacter johnsonii A2 and Rhodococcus sp. A5 were exposed simultaneously and CPD accumulation was studied. Gel analyses generated a total of 7 sequences belonging to Alpha-proteobacteria (1 band), Beta-proteobacteria (1 band), Bacteroidetes (2 bands), Actinobacteria (1 band), and Firmicutes (1 band). DGGE profi les showed minimal changes in BCC and no CPD was detected even though a high level of damage was found in biodosimeters. A. johnsonii A2 showed low level of DNA damage while Rhodococcus sp. A5 exhibited high resistance since no CPD were detected under natural UV-B exposure, suggesting that the bacterial community is well adapted to this highly solar irradiated environment

Investigations in associated protozoa-bacterial infections of cyprinids from a fish farm situated on the Jijia river in N-E of Romania / Investigações sobre infecções protozoárias-bacterianas associadas a ciprinídeos da exploração piscícola no rio Jijia, situado no NE da Romênia

In autumn 2011 in cyprinid farms located in Iasi on the Jijia river, several infections with bacterial strains and macroscopical external cysts on the skin were diagnosedwhich developed as a result of the stress induced by biotic and abiotic factors. On the examination of the cyst contents the presence of numerous spores was observed, mostly of the Dermocystidium sp genusThe samples were taken from the common carp (Cyprinus carpio) and crucian carp (Carassius auratus gibelio) species from the fish farm as well as from the Jijia River. 35 fish were examined, all of them showing cysts, fragmentation of their dorsal fin and congestion of the gills. Histological examination of the skin showed a field of multiple dermal cysts with round light eosinophilic formations (14-16µm) containing a central refractable body similar to that reported for Dermocystidium sp. Gills samples were taken from the affected areas for the SEM examination with the purpose of evaluating not only aspects of normal morphology, but also aspects of some modifications of the affected areas as well as the presence of the etiologically incriminated bacteria Pseudomonas fluorescens. The isolates were identified through phenotypic methods. All the strains that showed mobility and oxidase-positivity were tested using API 20 NE strip. Consequently, they were taxonomically grouped into the species Pseudomonas fluorescens. The scanning electron microscope (SEM) was used for the first time in the characterization of the bacterial lesions produced by Pseudomonas strains on Cyprinus carpio and Carassius auratus gibelio gills. The diagnosis of septicemia with conditional pathogen species of Pseudomonas fluorescens was correlated with the results of the physico-chemical investigations of water and the data concerning the breeding conditions of the investigated livestock...

No outono de 2011, em fazendas de ciprinídeos localizadas em Iasi, no rio Jijia, diversas infecções bacterianas e cistos externos macroscópicos na pele se desenvolveram como resultado do estresse induzido por fatores bióticos e abióticos. No exame do conteúdo dos cistos, a presença de diversos esporos foi observada, a maioria do gênero Dermocystidium sp. As amostras foram colhidas das seguintes espécies: carpa comum (Cyprinus carpio) e carpa cruciana (Carassius auratus gibelio) de fazenda piscícola, além do rio Jijia. Assim sendo, 35 peixes foram examinados, todos demonstrando cistos, fragmentação da barbatana dorsal e congestão das guelras. O exame histológico da pele mostrou um campo de múltiplos cistos dérmicos com formações circulares claras eosinofílicas (14-16µm) contendo corpo central refratado similar ao relatado para Dermocystidium sp. Amostras de guelras foram retiradas das áreas afetadas para exame MEV, com o propósito de se avaliar não apenas os aspectos da morfologia normal, mas também os aspectos de algumas modificações das áreas afetadas, além da presença da bactéria etiologicamente incriminada: Pseudomonas fluorescens. Os isolados foram identificados por meio de métodos fenotípicos. Todas as amostras que mostraram mobilidade e positividade-oxidase foram testadas usando-se fita API 20 NE. Consequentemente, estas foram taxonomicamente agrupadas na espécie Pseudomonas fluorescens. O microscópio eletrônico de varredura (MEV) foi usado pela primeira vez na caracterização de lesões bacterianas produzidas por Pseudomonas nas guelras de Cyprinus carpio e Carassius auratus gibelio. O diagnóstico de septicemia com espécies condicionais de patogênico de Pseudomonas fluorescens foi correlacionado com os resultados das investigações físico-químicas da água e de dados sobre as condições de reprodução dos animais investigados...

Yo soy yo y mi microbiota (parafraseando a Ortega y Gasset) / I'm me and my microbiota (paraphrasing Ortega y Gasset)

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Estructura y diversidad de la vegetación del Parque Nacional Natural de la Isla Gorgona, Colombia / Structure and diversity of the vegetation of the Gorgona Island National Natural Park, Colombia

Gorgona is a continental island in the Pacific of Colombia. We studied the structure and diversity of its vegetation with 16 Gentry transects (total area 0.16ha) in nine sites on the island. With these data, we calculate Importance Value Index (IVI), distribution of individuals according to their height and diameter at breast height (DBH), cumulative species curves, and species diversity. The vegetation is mainly secondary forest, with remnants of primary forest on the hills. By density, frequency, and coverage, the most important family is Rubiaceae, with 0.275 IVF. The species with the highest IVI (0.157) is Lacistema aggregatum (Lacistemataceae). In height and diameter classes (DBH), individuals have an inverted “J” distribution. The plant community has a Shannon-Wiener diversity index of 3.98. The cumulative species curve of the plant community does not level off even after more than ten transects. Transects were grouped in the similarity analysis but not strongly. There were species richness differences among transects. Rev. Biol. Trop. 62 (Suppl. 1): 13-26. Epub 2014 February 01.

En este trabajo, se estudió la estructura y diversidad de la vegetación en isla Gorgona, a través de 16 transectos de Gentry (área total de 0.16ha), distribuidos en nueve sitios de la isla. Se calculó el índice de Valor de Importancia para la especie y la familia (IVI e IVF respectivamente), la distribución de los individuos en función de su altura y diámetro a la altura del pecho (DAP ), las curvas de especies acumuladas , y la diversidad de especies. La vegetación de isla Gorgona estuvo conformada principalmente por bosque secundario, con restos de bosque primario en las partes altas de los cerros. De acuerdo con la densidad, la frecuencia, y la cobertura, la familia más importante fue Rubiaceae (IVF=0.275), mientras que la especie con el IVI más alto fue Lacistema aggregatum (Lacistemataceae, IVI=0.157). De acuerdo con la altura y clases de diámetro (DAP), la distribución de los individuos describió una forma de “J” invertida, con un valor de diversidad (H’) calculado de 3.98. Incluso después de más de diez transectos de muestreo, la curva de acumulación de especies no se niveló. Con base en el análisis de similitud, se estableció que los transectos estuvieron agrupados en zonas, de las cuales cuatro tuvieron un soporte estadístico, siendo incluso la riqueza de especies diferente entre los transectos.

Bioassessment using benthic macroinvertebrates of the water quality in the Tigreiro river, Jacuí Basin / Bioavaliação por macroinvertebrados bentônicos da qualidade da água no rio Tigreiro, Bacia do Jacuí

This study aimed to evaluate the water quality in the Tigreiro river, Jacuí river Basin, using different approaches. Benthic macroinvertebrates were sampled in July 2010 (winter) and February 2011 (summer) at five sites. In this study were analyzed: microbiological, physical and chemical variables, benthic macroinvertebrates richness and diversity, rapid ecological assessment protocol and benthic biotic indices (% EPT, BMWP'-IAP, ASPT, SOMI). A total of 5,852 individuals were collected belonging to 31 taxa of three Phyla: Annelida, Mollusca and Arthropoda. Chironomidae was the most abundant taxon (63.70%). A reduction in richness, diversity H' and evenness J' was observed from the initial stretches to the end stretches of Tigreiro river. The use of different approaches showed that sites in the rural area were less altered. The Tigreiro river was strongly impacted, mainly due to discharge of domestic effluents in the urban area, and the combination of different metrics was useful to detect impacted sites and the consequence for the water quality.

O objetivo deste estudo foi avaliar a qualidade de água do rio Tigreiro, bacia do rio Jacuí, pelo uso de diferentes abordagens. Macroinvertebrados bentônicos foram coletados em julho/2010 (inverno) e fevereiro/2011 (verão) em cinco pontos. Neste estudo foram analisados: variáveis microbiológicas, físicas e químicas, riqueza e diversidade de macroinvertebrados bentônicos, protocolo de avaliação ambiental rápida e índices bióticos de bentos (% EPT, BMWP'-IAP, ASPT, SOMI). Foram coletados 5.852 indivíduos pertencentes a 31 taxa de três Filos: Annelida, Mollusca e Arthropoda. Chironomidae foi o taxon dominante (63,70%). A redução de riqueza, diversidade H' e uniformidade J' ocorreram da porção inicial em direção à porção final do rio Tigreiro. O uso das diferentes abordagens mostrou que os pontos da área rural foram menos modificados. O rio Tigreiro apresentou-se fortemente impactado, principalmente pela descarga de esgotos domésticos na área urbana e o uso de diferentes métricas foi útil para detectar locais impactados e suas consequências para a qualidade de água.

Toxicidad aguda por cinc en Cnesterodon decemmaculatus (Pisces: Poeciliidae) y aplicación del Modelo de Ligando Biótico en agua del Río Pilcomayo (Sudamérica) / Acute zinc toxicity to Cnesterodon decemmaculatus (Pisces: Poeciliidae) and application of the Biotic Ligand Model in Pilcomayo River water (South America)

El Modelo del Ligando Biótico (BLM) es un modelo basado en el equilibrio químico. Incorpora el efecto de las características físico-químicas del agua en la biodisponibilidad y toxicidad de los metales sobre la biota acuática. Ha sido desarrollado para cuatro metales (Cu, Zn, Ag, Cd), dos especies de peces y tres de dáfnidos. Se asume que sus predicciones podrían ser extrapoladas a especies similares. En este estudio, se evaluó una posible extrapolación inter-especifica (peces) del BLM desarrollado para el zinc en agua del río Pilcomayo. Se llevó a cabo un ensayo de toxicidad aguda del zinc en el pez nativo Cnesterodon decemmaculatus. Las concentraciones de zinc disuelto aplicadas fueron: 0,13; 3,74; 9,2; 21,6 y 26,4 mg Zn L-1. La concentración letal media del zinc (CL50 96-h) calculada para C. decemmaculatus fue 22,6 mg Zn L-1 (17,5 - 27,6) y la predicha por el BLM para Pimephales promelas en el agua experimental fue 1,71 mg L-1. Las concentraciones de zinc medidas excedían la solubilidad del metal lo que produjo la precipitación del mismo, derivando en una 96-h CL50 que muy probablemente incluyó tanto especies de zinc disueltas como precipitadas. Sin embargo, las estimaciones de la especiación mostraron que la especie química del zinc más abundante en todos los tratamientos fue el ion libre. La mayor proporción de zinc en su forma iónica libre explicaría el bajo efecto protector de la elevada dureza del agua experimental. La diferencia entre la toxicidad del zinc observada y la predicha por el BLM podría deberse a la combinación de inexactitud en las mediciones de zinc disuelto y una menor sensibilidad de la especie experimental a la presencia de elevadas concentraciones de zinc (AU)

The Biotic Ligand Model (BLM) is a chemical equilibrium-based model that incorporates the effect of physicochemical water characteristics on the bioavailability and toxicity of metals to aquatic biota. It was developed for four metals (Cu, Zn, Ag and Cd), two fish species and three daphnids. It is assumed that its predictions can be extrapolated between similar species. In this study, a cross-fish-species extrapolation of the BLM developed for zinc (Zn-BLM) was assessed in Pilcomayo River water. An acute zinc toxicity test was performed to assess zinc toxicity to the local fish Cnesterodon decemmaculatus. The dissolved zinc concentrations tested were:3.74;9.2; 21.6 and 26.4 mg Zn L-1. The median letal zinc concentration (96-h Zn LC50) calculated for C. decemmaculatus was 22.6 mg Zn L-1 (17.5-27.6) and the predicted by Zn-BLM for Pimephales promelas in the test water was 1.71 mg L−1. Zinc concentrations measured exceeded zinc solubility causing metal precipitation which derived in a 96-h LC50 that most probably included both dissolved and precipitated zinc species. Nevertheless, speciation estimates showed that the more abundant zinc species in each treatment was the free ion. This higher proportion of zinc in its free ionic form would explain the low protective effect exerted by elevated water hardness. The difference between the observed zinc toxicity to C. decemmaculatus and the predicted by BLM for P. promelas may be due to the combination of inaccuracy in zinc dissolved measurements and a lower sensitivity of C. decemmaculatus to zinc exposure (AU)

Gut microbiota and the development of obesity / La microbiota intestinal y el desarrollo de la obesidad

Introduction: Advances in tools for molecular investigations have allowed deeper understanding of how microbes can influence host physiology. A very interesting field of research that has gained attention recently is the possible role of gut microbiota in the development of obesity and metabolic disorders. Objective: The aim of this review is to discuss mechanisms that explain the influence of gut microbiota on host metabolism. Results and discussion: The gut microbiota is important for normal physiology of the host. However, differences in their composition may have different impacts on host metabolism. It has been shown that obese and lean subjects present different microbiota composition profile. These differences in microbiota composition may contribute to weight imbalance and impaired metabolism. The evidences from animal models suggest that it is possible that the microbiota of obese subjects has higher capacity to harvest energy from the diet providing substrates that can activate lipogenic pathways. In addition, microorganisms can also influence the activity of lipoprotein lipase interfering in the accumulation of triglycerides in the adipose tissue. The interaction of gut microbiota with the endocannabinoid system provides a route through which intestinal permeability can be altered. Increased intestinal permeability allows the entrance of endotoxins to the circulation, which are related to the induction of inflammation and insulin resistance in mice. The impact of the proposed mechanisms for humans still needs further investigations. However, the fact that gut microbiota can be modulated through dietary components highlights the importance to study how fatty acids, carbohydrates, micronutrients, prebiotics, and probiotics can influence gut microbiota composition and the management of obesity. Gut microbiota seems to be an important and promising target in the prevention and treatment of obesity and its related metabolic disturbances in future studies and in clinical practice (AU)

Introducción: Los avances en herramientas para la investigación molecular han permitido una mayor comprensión de cómo los microbios pueden influir en la fisiología del huésped. Un campo de investigación muy interesante que se ha llamado la atención recientemente es el posible papel de la microbiota intestinal en el desarrollo de la obesidad y de los trastornos metabólicos. Objetivos: El objetivo de esta revisión es discutir los mecanismos que explican la influencia de la microbiota intestinal en el metabolismo del huésped. Resultados y discusión: La microbiota intestinal es importante para la fisiología normal del huésped. Sin embargo, las diferencias en su composición pueden tener efectos diferentes sobre el metabolismo del huésped. Se ha demostrado que las personas obesas y delgadas tienen un perfil de composición diferente de la microbiota. Estas diferencias en la composición de la microbiota pueden contribuir a un desequilibrio de peso y alteración del metabolismo. Las evidencias de los modelos animales sugieren que es posible que la microbiota de los sujetos obesos tienen una mayor capacidad para captar energía de la dieta proporcionando sustratos que pueden activar las vías lipogénicas. Además, los microorganismos también pueden influir en la actividad de la lipoproteína lipasa lo que interfiere con la acumulación de triglicéridos en el tejido adiposo. La interacción de la microbiota intestinal con el sistema endocannabinoide proporciona una ruta a través del cual puede alterar la permeabilidad intestinal. Aumento de la permeabilidad intestinal permite la entrada de la circulación de endotoxinas, que están relacionados con la inducción de la inflamación y la resistencia a la insulina en los ratones. El impacto de los mecanismos propuestos para los seres humanos todavía necesita uma mayor investigación. Sin embargo, el hecho de que la microbiota intestinal puede ser modulada por componentes de la dieta refuerza la importancia de estudiar cómo los ácidos grasos, hidratos de carbono, micronutrientes, prebióticos y probióticos pueden influir en la composición de la microbiota intestinal y el desarrollo de la obesidad. La microbiota intestinal parece ser un objetivo importante y prometedor en la prevención y el tratamiento de la obesidad y trastornos metabólicos relacionados en la investigación futura y la práctica clínica (AU)

Variação espaço-temporal na distribuição e abundância de Moenkhausia sanctaefilomenae (Characiformes: Characidae) em lagoas da planície de inundação do rio Cuiabá, Pantanal, Brasil / Spatial-temporal variation of the distribution and abundance of Moenkhausia sanctaefilomenae at lagoons of the Cuiaba river floodplain, Pantanal, Brazil

Identificar os fatores bióticos e abióticos que determinam a variação na distribuição e abundância das populações, tornou-se nos últimos anos um grande desafio para os ecologistas. Assim neste estudo foram avaliados o efeito das variáveis abióticas e a abundância de predadores sobre a abundância de Moenkhausia sanctaefilomenae, a variação no comprimento médio dos indivíduos entre lagoas e períodos e o efeito das variáveis abióticas e da abundância de predadores sobre a estrutura em comprimento. Foram amostradas 16 lagoas da planície de inundação do rio Cuiabá, no período de junho (vazante), setembro (seca) e dezembro (enchente) de 2005 e março (cheia) de 2006. Para M. sanctaefilomenae, a distribuição é mais ampla e a abundância é maior no final da vazante, início da seca, reduzindo-se gradualmente ao longo dos períodos de seca, enchente e cheia. Adicionalmente, o período afeta a estrutura em tamanho das populações, que são espacialmente homogêneas. Indivíduos menores foram capturados no final do período de vazante e os maiores ao início da enchente. Durante o final da vazante/início da seca, a variação espacial na abundância da população foi relacionada positivamente com o pH, o oxigênio dissolvido e cobertura de macrófitas e área da lagoa, mas, não com a abundância local de predadores na zona litorânea das lagoas.

Identifying the biotic and abiotic factors that determine the variation in the distribution and abundance of populations has become a great challenge for the field of ecology in recent years. Thus, in this study we evaluated the effect of abiotic variables and the abundance of predators on the abundance of Moenkhausia sanctaefilomenae, the variation in the average length of the individuals between lakes and periods, and the effect of the abiotic variables and abundance of predators on the structure in length of that species. Sixteen lakes of the Cuiabá river flood plain were sampled in June (drying period), September (dry period) and December (flooding period) 2005 and March (flood period) 2006. For M. sanctaefilomenae, the distribution is ampler and the abundance is greater at the end of the drying period, beginning of dry season, reducing gradually over the periods of dry, drying and flood season. Additionally, the period affects the structure in size of the populations that are spatially homogeneous. Smaller individuals were captured at the end of the drying period and the larger individuals at the start of flooding. During the end of the drying period and in the beginning of the dry season, the spatial variation in the abundance of the population was positively related with pH, dissolved oxygen and macrophyte cover and area of the lake, but not with the local abundance of predators in the littoral zone of the lakes.

When Basking Is Not an Option: Thermoregulation of a Viperid SnakeEndemic to a Small Island in the South Atlantic of Brazil

It is broadly accepted that snakes are able to regulate their body temperature (Tb) behaviorally, but fundamentaldifferences in this ability have been suggested to exist between temperate and tropical species. Herein, we examined the thermal ecology of the Golden Lancehead, Bothrops insularis, a critically endangered Neotropical crotaline snake endemic to Queimada Grande Island (QGI), southeastern Brazil. We sampled Tb’s of individual snakes found in the field and tested which proximal factors, biotic and abiotic, were potentially relevant for their thermoregulatory behavior and Tb selection. We verified whether Tb regulation would be compensated, through the day and/or seasons, by adjustments in the thermoregulatory effort. Finally, we hypothesized that for a Neotropical snake, the thermoregulatory effort would be lower because the thermal quality of habitat is higher compared to species inhabiting temperate zones. In general, B. insularis conformed to this hypothesis. However, seasonal declines in the thermal quality of habitat during the colder seasons and during nighttime were compensated by increases in the effectiveness of thermoregulation. Overall, Tb of B. insularis is determined largely by environmental variables, particularly air temperature, with some influence of biotic factors, such as body size. Use of open areas for basking, a common thermoregulatory behavior for squamates, was largely avoided; this may be explained by ecological factors, and may be due to foraging constraintsand increased risks of predation and dehydration.